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1.
Tissue Cell ; 72: 101551, 2021 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-33932879

RESUMO

Interleukin-8 (IL-8, CXCL8), a pro-inflammatory chemokine secreted by a variety of cell types, plays a critical role in the development of various immune diseases. Interactions between IL-8 and its receptor CXC receptor 1/2 (CXCR1/2) are known to promote chemotaxis and phagocytosis in many immune responses. In this study, we report the molecular characteristics and pharmacological activity of CXCR1 (MsCXCR1) in largemouth bass (Micropterus salmoides) and evaluated the functional involvement of MsCXCR1 in individuals infected with the pathogen Nocardia seriolae. MsCXCR1 was cloned into the pEGFP-N1 plasmid and the subcellular localization of MsCXCR1 on the cell membrane was verified in MsCXCR1-EGFP-expressing HEK293 cells. Following observation of receptor internalization and intracellular signaling detection, we further determined the functional interaction of secreted interleukin-8 (LcIL-8, the ligand for CXCR1 in large yellow croaker) and MsCXCR1 was further determined, and the ERK phosphorylation signal activation mediated by MsCXCR1 was demonstrated. Quantitative real-time PCR assays were conducted to analyze the transcriptional distribution of MsCXCR1 in various tissues of healthy and diseased largemouth bass. These results illustrate the significant elevation of MsCXCR1 expression in the head kidney, spleen and liver of M. salmoides, suggesting that MsCXCR1 was involved in the immune response in N. seriolae-infected largemouth bass and potentially affects the digestive function of this species.


Assuntos
Bass/microbiologia , Doenças dos Peixes/genética , Doenças dos Peixes/microbiologia , Nocardiose/microbiologia , Nocardiose/veterinária , Nocardia/fisiologia , Receptores de Interleucina-8A/metabolismo , Sequência de Aminoácidos , Animais , Sequência de Bases , Bass/anatomia & histologia , Bass/genética , Endocitose , Ativação Enzimática , MAP Quinases Reguladas por Sinal Extracelular/metabolismo , Doenças dos Peixes/patologia , Proteínas de Fluorescência Verde/metabolismo , Células HEK293 , Humanos , Interleucina-8/metabolismo , Nocardiose/genética , Nocardiose/patologia , Fosforilação/efeitos dos fármacos , Filogenia , Receptores de Interleucina-8A/química , Receptores de Interleucina-8A/genética , Transcrição Gênica
2.
PLoS Comput Biol ; 17(5): e1008593, 2021 05.
Artigo em Inglês | MEDLINE | ID: mdl-34014914

RESUMO

The dynamic interactions between G protein-coupled receptors (GPCRs) and their cognate protein partners are central to several cell signaling pathways. For example, the association of CXC chemokine receptor 1 (CXCR1) with its cognate chemokine, interleukin-8 (IL8 or CXCL8) initiates pathways leading to neutrophil-mediated immune responses. The N-terminal domain of chemokine receptors confers ligand selectivity, but unfortunately the conformational dynamics of this intrinsically disordered region remains unresolved. In this work, we have explored the interaction of CXCR1 with IL8 by microsecond time scale coarse-grain simulations, complemented by atomistic models and NMR chemical shift predictions. We show that the conformational plasticity of the apo-receptor N-terminal domain is restricted upon ligand binding, driving it to an open C-shaped conformation. Importantly, we corroborated the dynamic complex sampled in our simulations against chemical shift perturbations reported by previous NMR studies and show that the trends are similar. Our results indicate that chemical shift perturbation is often not a reporter of residue contacts in such dynamic associations. We believe our results represent a step forward in devising a strategy to understand intrinsically disordered regions in GPCRs and how they acquire functionally important conformational ensembles in dynamic protein-protein interfaces.


Assuntos
Receptores de Interleucina-8A/química , Sequência de Aminoácidos , Biologia Computacional , Simulação por Computador , Humanos , Interleucina-8/química , Interleucina-8/metabolismo , Proteínas Intrinsicamente Desordenadas/química , Ligantes , Espectroscopia de Ressonância Magnética , Modelos Moleculares , Simulação de Dinâmica Molecular , Ligação Proteica , Conformação Proteica , Domínios e Motivos de Interação entre Proteínas , Mapeamento de Interação de Proteínas , Receptores de Interleucina-8A/genética , Receptores de Interleucina-8A/metabolismo
3.
Nat Commun ; 10(1): 5166, 2019 11 14.
Artigo em Inglês | MEDLINE | ID: mdl-31727891

RESUMO

Immune cells congregate at specific loci to fight infections during inflammatory responses, a process that must be transient and self-resolving. Cell dispersal promotes resolution, but it remains unclear how transition from clustering to dispersal is regulated. Here we show, using quantitative live imaging in zebrafish, that differential ligand-induced trafficking of chemokine receptors such as Cxcr1 and Cxcr2 orchestrates the state of neutrophil congregation at sites of tissue damage. Through receptor mutagenesis and biosensors, we show that Cxcr1 promotes clustering at wound sites, but is promptly desensitized and internalized, which prevents excess congregation. By contrast, Cxcr2 promotes bidirectional motility and is sustained at the plasma membrane. Persistent plasma membrane residence of Cxcr2 prolongs downstream signaling and is required for sustained exploratory motion conducive to dispersal. Thus, differential trafficking of two chemokine receptors allows coordination of antagonistic cell behaviors, promoting a self-resolving migratory response.


Assuntos
Neutrófilos/metabolismo , Receptores de Interleucina-8A/metabolismo , Receptores de Interleucina-8B/metabolismo , Ferimentos e Lesões/patologia , Proteínas de Peixe-Zebra/metabolismo , Peixe-Zebra/metabolismo , Sequência de Aminoácidos , Animais , Membrana Celular/metabolismo , Movimento Celular , Regulação para Baixo , Endocitose , Modelos Biológicos , Mutagênese/genética , Mutação/genética , Transporte Proteico , Receptores de Interleucina-8A/química , Receptores de Interleucina-8A/genética , Receptores de Interleucina-8B/química , Receptores de Interleucina-8B/genética , Fatores de Tempo , Proteínas de Peixe-Zebra/química , Proteínas de Peixe-Zebra/genética
4.
Sci Rep ; 9(1): 5317, 2019 03 29.
Artigo em Inglês | MEDLINE | ID: mdl-30926935

RESUMO

CXCR1, a member in G-protein coupled receptor (GPCR) family, binds to chemokine interleukin-8 (IL-8) specifically and transduces signals to mediate immune and inflammatory responses. Despite the importance of CXCR1, high-resolution structure determination is hindered by the challenges in crystallization. It has been shown that properly designed mutants with enhanced thermostability, together with fusion partner proteins, can be useful to form crystals for GPCR proteins. In this study, in silico protein design was carried out by using homology modeling and molecular dynamics simulations. To validate the computational modeling results, the thermostability of several mutants and the wild type were measured experimentally. Both computational results and experimental data suggest that the mutant L126W has a significant improvement in the thermostability. This study demonstrated that in silico design can guide protein engineering and potentially facilitate protein crystallography research.


Assuntos
Simulação de Acoplamento Molecular , Simulação de Dinâmica Molecular , Muramidase/química , Muramidase/metabolismo , Engenharia de Proteínas , Receptores de Interleucina-8A/química , Receptores de Interleucina-8A/metabolismo , Sequência de Aminoácidos , Sítios de Ligação , Muramidase/genética , Mutação , Ligação Proteica , Domínios e Motivos de Interação entre Proteínas , Estabilidade Proteica , Receptores de Interleucina-8A/genética , Relação Estrutura-Atividade , Termodinâmica
5.
Biochemistry ; 58(10): 1432-1439, 2019 03 12.
Artigo em Inglês | MEDLINE | ID: mdl-30726064

RESUMO

Chemokines play important roles in immune defense by directing migration of leukocytes and serve as key promoters of tumorigenesis and metastasis. This study explores the molecular mechanisms of recognition and activation of two homologous chemokine receptors, CXCR1 and CXCR2, using CXCL8 analogues with residue substitutions in the conserved Glu4Leu5Arg6 (ELR) triad. Analysis of the binding of CXCL8 analogues to CXCR1 is consistent with the two-site model for signal recognition of CXCR1, whereas analysis of the binding of CXCL8 analogues to CXCR2 supported a single-site model for signal recognition of CXCR2. The CXCL8-Arg6His analogue stimulated calcium release, phosphorylation of ERK1/2, and chemotaxis in cells expressing CXCR1. However, CXCL8-Arg6His failed to stimulate calcium release and chemotaxis in cells expressing CXCR2, although it stimulated phosphorylation of ERK1/2, indicating that CXCL8-Arg6His operated as a classical CXCR2 biased agonist. The CXCL8-Glu4AlaLeu5AlaArg6His analogue was inactive in cells expressing CXCR1 and CXCR2. These findings suggest that the Glu4Leu5 motif in CXCL8 is essential for activation of CXCR1 and CXCR2. Importantly, CXCL8-Glu4AlaLeu5AlaArg6His blocked specifically the calcium release and chemotaxis of cells expressing CXCR1 but not of cells expressing CXCR2. CXCL8-Glu4AlaLeu5AlaArg6His was identified as the first specific CXCR1 antagonist. The binding of CXCL8-ELR6H to CXCR1 created a Zn2+ coordination site at the receptor activation domain responsible for calcium release, as ZnCl2 specifically blocked CXCL8-Arg6His-induced calcium release without affecting CXCL8-induced calcium release. This work provides the basis for further exploration of the activation mechanisms of chemokine receptors and will assist in the design of the next generation of modulators of CXCR1 and CXCR2.


Assuntos
Quimiocinas/química , Quimiocinas/síntese química , Quimiocinas/genética , Sítios de Ligação/genética , Cálcio/metabolismo , Quimiotaxia , Células HL-60 , Humanos , Interleucina-8/química , Interleucina-8/genética , Sistema de Sinalização das MAP Quinases/fisiologia , Fosforilação , Ligação Proteica/genética , Receptores de Interleucina-8A/química , Receptores de Interleucina-8A/genética , Receptores de Interleucina-8B/química , Receptores de Interleucina-8B/genética , Transdução de Sinais
6.
Molecules ; 23(11)2018 Oct 31.
Artigo em Inglês | MEDLINE | ID: mdl-30384436

RESUMO

Interleukin-8 (CXCL8), a potent neutrophil-activating chemokine, exerts its function by activating the CXCR1 receptor that belongs to class A G protein-coupled receptors (GPCRs). Receptor activation involves interactions between the CXCL8 N-terminal loop and CXCR1 N-terminal domain (N-domain) residues (Site-I) and between the CXCL8 N-terminal and CXCR1 extracellular/transmembrane residues (Site-II). CXCL8 exists in equilibrium between monomers and dimers, and it is known that the monomer binds CXCR1 with much higher affinity and that Site-I interactions are largely responsible for the differences in monomer vs. dimer affinity. Here, using backbone 15N-relaxation nuclear magnetic resonance (NMR) data, we characterized the dynamic properties of the CXCL8 monomer and the CXCR1 N-domain in the free and bound states. The main chain of CXCL8 appears largely rigid on the picosecond time scale as evident from high order parameters (S²). However, on average, S² are higher in the bound state. Interestingly, several residues show millisecond-microsecond (ms-µs) dynamics only in the bound state. The CXCR1 N-domain is unstructured in the free state but structured with significant dynamics in the bound state. Isothermal titration calorimetry (ITC) data indicate that both enthalpic and entropic factors contribute to affinity, suggesting that increased slow dynamics in the bound state contribute to affinity. In sum, our data indicate a critical and complex role for dynamics in driving CXCL8 monomer-CXCR1 Site-I interactions.


Assuntos
Interleucina-8/química , Complexos Multiproteicos/química , Receptores de Interleucina-8A/química , Termodinâmica , Sequência de Aminoácidos/genética , Humanos , Interleucina-8/genética , Ressonância Magnética Nuclear Biomolecular , Ligação Proteica , Domínios Proteicos/genética , Mapeamento de Interação de Proteínas , Multimerização Proteica , Receptores de Interleucina-8A/genética
7.
Chem Phys Lipids ; 210: 142-148, 2018 01.
Artigo em Inglês | MEDLINE | ID: mdl-28939366

RESUMO

The CXC chemokine receptor 1 (CXCR1) is an important member of the G protein-coupled receptor (GPCR) family in which the extracellular N-terminal domain has been implicated in ligand binding and selectivity. The structure of this domain has not yet been elucidated due to its inherent dynamics, but experimental evidence points toward membrane-dependent organization and dynamics. To gain molecular insight into the interaction of the N-terminal domain with the membrane bilayer, we performed a series of microsecond time scale atomistic simulations of the N-terminal domain of CXCR1 in the presence and absence of POPC bilayers. Our results show that the peptide displays a high propensity to adopt a ß-sheet conformation in the presence of the membrane bilayer. The interaction of the peptide with the membrane bilayer was found to be transient in our simulations. Interestingly, a scrambled peptide, containing the same residues in a randomly varying sequence, did not exhibit membrane-modulated structural dynamics. These results suggest that sequence-dependent electrostatics, modulated by the membrane, could play an important role in folding of the N-terminal domain. We believe that our results reinforce the emerging paradigm that cellular membranes could be important modulators of function of G protein-coupled receptors such as CXCR1.


Assuntos
Bicamadas Lipídicas/química , Simulação de Dinâmica Molecular , Receptores de Interleucina-8A/química , Humanos
8.
Biophys J ; 113(12): 2695-2705, 2017 Dec 19.
Artigo em Inglês | MEDLINE | ID: mdl-29262362

RESUMO

The human chemokine interleukin-8 (IL-8; CXCL8) is a key mediator of innate immune and inflammatory responses. This small, soluble protein triggers a host of biological effects upon binding and activating CXCR1, a G protein-coupled receptor, located in the cell membrane of neutrophils. Here, we describe 1H-detected magic angle spinning solid-state NMR studies of monomeric IL-8 (1-66) bound to full-length and truncated constructs of CXCR1 in phospholipid bilayers under physiological conditions. Cross-polarization experiments demonstrate that most backbone amide sites of IL-8 (1-66) are immobilized and that their chemical shifts are perturbed upon binding to CXCR1, demonstrating that the dynamics and environments of chemokine residues are affected by interactions with the chemokine receptor. Comparisons of spectra of IL-8 (1-66) bound to full-length CXCR1 (1-350) and to N-terminal truncated construct NT-CXCR1 (39-350) identify specific chemokine residues involved in interactions with binding sites associated with N-terminal residues (binding site-I) and extracellular loop and helical residues (binding site-II) of the receptor. Intermolecular paramagnetic relaxation enhancement broadening of IL-8 (1-66) signals results from interactions of the chemokine with CXCR1 (1-350) containing Mn2+ chelated to an unnatural amino acid assists in the characterization of the receptor-bound form of the chemokine.


Assuntos
Interleucina-8/química , Interleucina-8/metabolismo , Ressonância Magnética Nuclear Biomolecular , Receptores de Interleucina-8A/metabolismo , Humanos , Bicamadas Lipídicas/metabolismo , Modelos Moleculares , Ligação Proteica , Conformação Proteica , Receptores de Interleucina-8A/química
9.
Int J Mol Sci ; 18(9)2017 Sep 03.
Artigo em Inglês | MEDLINE | ID: mdl-28869519

RESUMO

Tyrosine sulfation, a post-translational modification found on many chemokine receptors, typically increases receptor affinity for the chemokine ligand. A previous bioinformatics analysis suggested that a sulfotyrosine (sY)-binding site on the surface of the chemokine CXCL12 may be conserved throughout the chemokine family. However, the extent to which receptor tyrosine sulfation contributes to chemokine binding has been examined in only a few instances. Computational solvent mapping correctly identified the conserved sulfotyrosine-binding sites on CXCL12 and CCL21 detected by nuclear magnetic resonance (NMR) spectroscopy, demonstrating its utility for hot spot analysis in the chemokine family. In this study, we analyzed five chemokines that bind to CXCR2, a subset of which also bind to CXCR1, to identify hot spots that could participate in receptor binding. A cleft containing the predicted sulfotyrosine-binding pocket was identified as a principal hot spot for ligand binding on the structures of CXCL1, CXCL2, CXCL7, and CXCL8, but not CXCL5. Sulfotyrosine titrations monitored via NMR spectroscopy showed specific binding to CXCL8, but not to CXCL5, which is consistent with the predictions from the computational solvent mapping. The lack of CXCL5-sulfotyrosine interaction and the presence of CXCL8-sulfotyrosine binding suggests a role for receptor post-translational modifications regulating ligand selectivity.


Assuntos
Receptores de Interleucina-8A/química , Receptores de Interleucina-8B/química , Tirosina/análogos & derivados , Sítios de Ligação , Humanos , Ligantes , Espectroscopia de Ressonância Magnética , Modelos Moleculares , Conformação Molecular , Ligação Proteica , Receptores de Interleucina-8A/metabolismo , Receptores de Interleucina-8B/metabolismo , Relação Estrutura-Atividade , Tirosina/química , Tirosina/metabolismo
10.
Cytokine Growth Factor Rev ; 31: 61-71, 2016 10.
Artigo em Inglês | MEDLINE | ID: mdl-27578214

RESUMO

Persistent infection or chronic inflammation contributes significantly to tumourigenesis and tumour progression. C-X-C motif ligand 8 (CXCL8) is a chemokine that acts as an important multifunctional cytokine to modulate tumour proliferation, invasion and migration in an autocrine or paracrine manner. Studies have suggested that CXCL8 and its cognate receptors, C-X-C chemokine receptor 1 (CXCR1) and C-X-C chemokine receptor 2 (CXCR2), mediate the initiation and development of various cancers including breast cancer, prostate cancer, lung cancer, colorectal carcinoma and melanoma. CXCL8 also integrates with multiple intracellular signalling pathways to produce coordinated effects. Neovascularisation, which provides a basis for fostering tumour growth and metastasis, is now recognised as a critical function of CXCL8 in the tumour microenvironment. In this review, we summarize the biological functions and clinical significance of the CXCL8 signalling axis in cancer. We also propose that CXCL8 may be a potential therapeutic target for cancer treatment.


Assuntos
Interleucina-8/metabolismo , Neoplasias/metabolismo , Receptores de Interleucina-8A/metabolismo , Receptores de Interleucina-8B/metabolismo , Animais , Humanos , Interleucina-8/química , Terapia de Alvo Molecular , Conformação Proteica , Receptores de Interleucina-8A/química , Receptores de Interleucina-8B/química , Transdução de Sinais
11.
J Biomol NMR ; 61(3-4): 185-96, 2015 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-25430059

RESUMO

The use of paramagnetic constraints in protein NMR is an active area of research because of the benefits of long-range distance measurements (>10 Å). One of the main issues in successful execution is the incorporation of a paramagnetic metal ion into diamagnetic proteins. The most common metal ion tags are relatively long aliphatic chains attached to the side chain of a selected cysteine residue with a chelating group at the end where it can undergo substantial internal motions, decreasing the accuracy of the method. An attractive alternative approach is to incorporate an unnatural amino acid that binds metal ions at a specific site on the protein using the methods of molecular biology. Here we describe the successful incorporation of the unnatural amino acid 2-amino-3-(8-hydroxyquinolin-3-yl)propanoic acid (HQA) into two different membrane proteins by heterologous expression in E. coli. Fluorescence and NMR experiments demonstrate complete replacement of the natural amino acid with HQA and stable metal chelation by the mutated proteins. Evidence of site-specific intra- and inter-molecular PREs by NMR in micelle solutions sets the stage for the use of HQA incorporation in solid-state NMR structure determinations of membrane proteins in phospholipid bilayers.


Assuntos
Alanina/análogos & derivados , Espectroscopia de Ressonância de Spin Eletrônica/métodos , Hidroxiquinolinas/química , Interleucina-8/análise , Ressonância Magnética Nuclear Biomolecular/métodos , Receptores de Interleucina-8A/análise , Alanina/síntese química , Alanina/química , Sequência de Aminoácidos , Substituição de Aminoácidos , Aminoácidos/síntese química , Aminoácidos/química , Sítios de Ligação/fisiologia , Escherichia coli/genética , Escherichia coli/metabolismo , Hidroxiquinolinas/síntese química , Interleucina-8/química , Interleucina-8/genética , Proteínas de Membrana/análise , Modelos Moleculares , Dados de Sequência Molecular , Propionatos/síntese química , Propionatos/química , Ligação Proteica/fisiologia , Estrutura Terciária de Proteína , Receptores de Interleucina-8A/química , Receptores de Interleucina-8A/genética
12.
Protein Sci ; 24(1): 81-92, 2015 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-25327289

RESUMO

Chemokine CXCL8 and its receptor CXCR1 are key mediators in combating infection and have also been implicated in the pathophysiology of various diseases including chronic obstructive pulmonary disease (COPD) and cancer. CXCL8 exists as monomers and dimers but monomer alone binds CXCR1 with high affinity. CXCL8 function involves binding two distinct CXCR1 sites - the N-terminal domain (Site-I) and the extracellular/transmembrane domain (Site-II). Therefore, higher monomer affinity could be due to stronger binding at Site-I or Site-II or both. We have now characterized the binding of a human CXCR1 N-terminal domain peptide (hCXCR1Ndp) to WT CXCL8 under conditions where it exists as both monomers and dimers. We show that the WT monomer binds the CXCR1 N-domain with much higher affinity and that binding is coupled to dimer dissociation. We also characterized the binding of two CXCL8 monomer variants and a trapped dimer to two different hCXCR1Ndp constructs, and observe that the monomer binds with ∼10- to 100-fold higher affinity than the dimer. Our studies also show that the binding constants of monomer and dimer to the receptor peptides, and the dimer dissociation constant, can vary significantly as a function of pH and buffer, and so the ability to observe WT monomer peaks is critically dependent on NMR experimental conditions. We conclude that the monomer is the high affinity CXCR1 agonist, that Site-I interactions play a dominant role in determining monomer vs. dimer affinity, and that the dimer plays an indirect role in regulating monomer function.


Assuntos
Interleucina-8/química , Receptores de Interleucina-8A/química , Sequência de Aminoácidos , Sítios de Ligação , Humanos , Interleucina-8/metabolismo , Modelos Moleculares , Dados de Sequência Molecular , Ressonância Magnética Nuclear Biomolecular , Ligação Proteica , Multimerização Proteica , Estrutura Terciária de Proteína , Receptores de Interleucina-8A/metabolismo
13.
Sci Signal ; 7(341): pe21, 2014 Sep 02.
Artigo em Inglês | MEDLINE | ID: mdl-25185155

RESUMO

Chemokine receptors are heterotrimeric guanine nucleotide-binding protein (G protein)-coupled receptors (GPCR) that play fundamental roles in many physiological and pathological processes. Typically, these receptors form a seven-transmembrane helix bundle, which is stabilized by a disulfide bond bridging the top of the third transmembrane segment (TM3) and the second extracellular loop (ECL2). Resolution of the three-dimensional structures of the chemokine receptors CXCR1, CXCR4, and CCR5 revealed the existence of a second disulfide bridge that links the N terminus of the receptor to the top of the seventh transmembrane segment (TM7), thereby closing the receptor into a ring. An important consequence of this second disulfide bond is the formation of an additional extracellular loop, which shapes the entrance of the ligand-binding pocket and adds rigidity to the overall surface of the receptor. Here, we discuss the features of these "pseudo-loops," the structural requirements for their formation, and the effects they may have on receptor function.


Assuntos
Receptores de Quimiocinas/química , Cristalografia por Raios X , Dissulfetos , Humanos , Estrutura Secundária de Proteína , Estrutura Terciária de Proteína , Receptores CCR5/química , Receptores CXCR4/química , Receptores Acoplados a Proteínas G/química , Receptores de Interleucina-8A/química , Alinhamento de Sequência
14.
Fish Shellfish Immunol ; 40(1): 304-18, 2014 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-24945570

RESUMO

The CXCR1 and CXCR2 are the prototypical receptors and are the only known receptors for mammalian ELR+ (Glu-Leu-Arg) CXC chemokines, including CXCL8 (interleukin 8). These receptors transduce the ELR+ chemokine signals and operate the downstream signaling pathways in inflammation and innate immunity. In this study, we report the identification and characterization of CXCR1 and CXCR2 genes from rock bream fish (OfCXCR1 and OfCXCR2) at the molecular level. The cDNA and genomic DNA sequences of the OfCXCR1 and OfCXCR2 were identified from a transcriptome library and a custom-constructed BAC library, respectively. Both OfCXCR genes consisted of two exons, separated by an intron. The 5'-flanking regions of OfCXCR genes possessed multiple putative transcription factor binding sites related to immune response. The coding sequences of OfCXCR1 and OfCXCR2 encoded putative peptides of 355 and 360 amino acids (aa), respectively. The deduced aa sequences of OfCXCR1 and OfCXCR2 comprised of a G-protein coupled receptors (GPCR) family 1 profile with a GPCR signature and a DRY motif. In addition, seven conserved transmembrane regions were predicted in both OfCXCRs. While our multiple alignment study revealed the functionally significant conserved elements of the OfCXCR1 and OfCXCR2, phylogeny analyses further confirmed their position in teleost sub clade, in which they manifested an evolutionary relatedness with other fish counterparts. Based on comparative analyses, teleost CXC chemokine receptors appear to be distinct from their non-fish orthologs in terms of evolution (both CXCR1 and CXCR2) and genomic organization (CXCR2). Quantitative real-time PCR (qPCR) detected the transcripts of OfCXCR1 and OfCXCR2 in eleven examined tissues, with higher levels in head kidney, kidney and spleen highlighting their crucial importance in immunity. In vitro stimulation of peripheral blood leukocytes (PBLs) with concanavalin A (Con A) resulted in modulation of OfCXCR2 transcription, but not that of OfCXCR1. In addition, the magnitude of the OfCXCR1 and OfCXCR2 transcripts in head kidney and spleen was differentially increased after the in vivo administration of immune stimulants, LPS and poly I:C and in the infection models injected with rock bream irido virus, Edwardsiella tarda and Streptococcus iniae. These lines of evidence suggest that these receptors may play an important role(s) in immune responsive signaling during pathogenesis of rock bream.


Assuntos
Proteínas de Peixes/genética , Regulação da Expressão Gênica , Imunidade Inata , Perciformes/genética , Perciformes/imunologia , Receptores de Interleucina-8A/genética , Receptores de Interleucina-8B/genética , Sequência de Aminoácidos , Animais , Sequência de Bases , Edwardsiella tarda/fisiologia , Proteínas de Peixes/química , Proteínas de Peixes/metabolismo , Iridoviridae/fisiologia , Dados de Sequência Molecular , Perciformes/metabolismo , Filogenia , RNA Mensageiro/genética , RNA Mensageiro/metabolismo , Reação em Cadeia da Polimerase em Tempo Real/veterinária , Receptores de Interleucina-8A/química , Receptores de Interleucina-8A/metabolismo , Receptores de Interleucina-8B/química , Receptores de Interleucina-8B/metabolismo , Alinhamento de Sequência/veterinária , Streptococcus/fisiologia
15.
PLoS One ; 9(4): e94178, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-24705928

RESUMO

Chemokine CXCL-8 plays a central role in human immune response by binding to and activate its cognate receptor CXCR1, a member of the G-protein coupled receptor (GPCR) family. The full-length structure of CXCR1 is modeled by combining the structures of previous NMR experiments with those from homology modeling. Molecular docking is performed to search favorable binding sites of monomeric and dimeric CXCL-8 with CXCR1 and a mutated form of it. The receptor-ligand complex is embedded into a lipid bilayer and used in multi ns molecular dynamics (MD) simulations. A multi-steps binding mode is proposed: (i) the N-loop of CXCL-8 initially binds to the N-terminal domain of receptor CXCR1 driven predominantly by electrostatic interactions; (ii) hydrophobic interactions allow the N-terminal Glu-Leu-Arg (ELR) motif of CXCL-8 to move closer to the extracellular loops of CXCR1; (iii) electrostatic interactions finally dominate the interaction between the N-terminal ELR motif of CXCL-8 and the EC-loops of CXCR1. Mutation of CXCR1 abrogates this mode of binding. The detailed binding process may help to facilitate the discovery of agonists and antagonists for rational drug design.


Assuntos
Interleucina-8/química , Interleucina-8/metabolismo , Modelos Moleculares , Receptores de Interleucina-8A/química , Receptores de Interleucina-8A/metabolismo , Humanos , Interações Hidrofóbicas e Hidrofílicas , Ligantes , Bicamadas Lipídicas/química , Bicamadas Lipídicas/metabolismo , Simulação de Acoplamento Molecular , Simulação de Dinâmica Molecular , Ligação Proteica , Conformação Proteica
16.
Phys Chem Chem Phys ; 16(17): 8036-43, 2014 May 07.
Artigo em Inglês | MEDLINE | ID: mdl-24647967

RESUMO

Peptide based inhibitors of protein-protein interactions are of great interest in proteomics, structural biology and medicinal chemistry. Optimized inhibitors can be designed by experimental approaches or by computational prediction. Ideally, computational models are adjusted to the peptide-protein complex of interest according to experimental data obtained in specific binding experiments. The chemokine CXCL8 (interleukin-8) is an interesting target for drug discovery due to its role in inflammatory diseases. Given the available structural data and information on its receptor interactions it constitutes a basis for the rational design of inhibitor peptides. Starting from the reported structure of CXCL8 in complex with a peptide derived from its receptor CXCR1 we developed a computational docking procedure to estimate the changes in binding energy as a function of individual amino acid exchanges. This indicates whether the respective amino acid residue must be preserved or can be substituted to maintain or improve affinity, respectively. To validate and improve the assumptions made in this docking simulation we established a fluorescence polarization assay for receptor-derived peptides binding to CXCL8. A peptide library was tested comprising selected mutants characterized by docking simulations. A number of predictions regarding electrostatic interactions were confirmed by these experiments and it was revealed that the model needed to be corrected for backbone flexibility. Therefore, the assay presented here is a promising tool to systematically improve the computational model by iterative cycles of modeling, experimental validation and refinement of the algorithm, leading to a more reliable model and peptides with improved affinity.


Assuntos
Polarização de Fluorescência/métodos , Interleucina-8/metabolismo , Peptídeos/metabolismo , Receptores de Interleucina-8A/metabolismo , Sequência de Aminoácidos , Humanos , Interleucina-8/química , Simulação de Acoplamento Molecular , Dados de Sequência Molecular , Peptídeos/química , Ligação Proteica , Receptores de Interleucina-8A/química
17.
Protein Sci ; 23(4): 464-80, 2014 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-24442768

RESUMO

Interleukin-8 (CXCL8, IL-8) is a proinflammatory chemokine important for the regulation of inflammatory and immune responses via its interaction with G-protein coupled receptors, including CXC receptor 1 (CXCR1). CXCL8 exists as both a monomer and as a dimer at physiological concentrations, yet the molecular basis of CXCL8 interaction with its receptor as well as the importance of CXCL8 dimer formation remain poorly characterized. Although several biological studies have indicated that both the CXCL8 monomer and dimer are active, biophysical studies have reported conflicting results regarding the binding of CXCL8 to CXCR1. To clarify this problem, we expressed and purified a peptide (hCXCR1pep) corresponding to the N-terminal region of human CXCR1 (hCXCR1) and utilized nuclear magnetic resonance (NMR) spectroscopy to interrogate the binding of wild-type CXCL8 and a previously reported mutant (CXCL8M) that stabilizes the monomeric form. Our data reveal that the CXCL8 monomer engages hCXCR1pep with a slightly higher affinity than the CXCL8 dimer, but that the CXCL8 dimer does not dissociate upon binding hCXCR1pep. These investigations also showed that CXCL8 is dynamic on multiple timescales, which may help explain the versatility in this interleukin for engaging its target receptors.


Assuntos
Interleucina-8/metabolismo , Peptídeos/metabolismo , Receptores de Interleucina-8A/química , Receptores de Interleucina-8A/metabolismo , Termodinâmica , Humanos , Interleucina-8/química , Espectroscopia de Ressonância Magnética , Modelos Moleculares , Peptídeos/química
18.
Biochem J ; 456(2): 241-51, 2013 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-24032673

RESUMO

Chemokines mediate diverse functions from organogenesis to mobilizing leucocytes, and are unusual agonists for class-A GPCRs (G-protein-coupled receptors) because of their large size and multi-domain structure. The current model for receptor activation, which involves interactions between chemokine N-loop and receptor N-terminal residues (Site-I) and between chemokine N-terminal and receptor extracellular loop/transmembrane residues (Site-II), fails to describe differences in ligand/receptor selectivity and the activation of multiple signalling pathways. In the present study, we show in neutrophil-activating chemokine CXCL8 that the highly conserved GP (glycine-proline) motif located distal to both N-terminal and N-loop residues couples Site-I and Site-II interactions. GP mutants showed large differences from native-like to complete loss of function that could not be correlated with the specific mutation, receptor affinity or subtype, or a specific signalling pathway. NMR studies indicated that the GP motif does not influence Site-I interactions, but molecular dynamics simulations suggested that this motif dictates substates of the CXCL8 conformational ensemble. We conclude that the GP motif enables diverse receptor functions by controlling cross-talk between Site-I and Site-II, and further propose that the repertoire of chemokine functions is best described by a conformational ensemble model in which a network of long-range coupled indirect interactions mediate receptor activity.


Assuntos
Interleucina-8/química , Receptores de Interleucina-8A/química , Receptores de Interleucina-8B/química , Sequência de Aminoácidos , Substituição de Aminoácidos , Animais , Sítios de Ligação , Sinalização do Cálcio , Linhagem Celular , Sequência Conservada , Feminino , Interleucina-8/metabolismo , Ligantes , Camundongos , Camundongos Endogâmicos BALB C , Simulação de Dinâmica Molecular , Dados de Sequência Molecular , Neutrófilos/imunologia , Ligação Proteica , Estrutura Terciária de Proteína , Ratos , Receptores de Interleucina-8A/genética , Receptores de Interleucina-8A/metabolismo , Receptores de Interleucina-8B/genética , Receptores de Interleucina-8B/metabolismo
19.
Biosci Rep ; 33(5)2013 Sep 17.
Artigo em Inglês | MEDLINE | ID: mdl-23919527

RESUMO

IL (interleukin)-8 [CXCL8 (CXC chemokine ligand 8)] exerts its role in inflammation by triggering neutrophils via its specific GPCRs (G-protein-coupled receptors), CXCR1 (CXC chemokine receptor 1) and CXCR2, for which additional binding to endothelial HS-GAGs (heparan sulphate-glycosaminoglycans) is required. We present here a novel approach for blocking the CXCL8-related inflammatory cascade by generating dominant-negative CXCL8 mutants with improved GAG-binding affinity and knocked-out CXCR1/CXCR2 activity. These non-signalling CXCL8 decoy proteins are able to displace WT (wild-type) CXCL8 and to prevent CXCR1/CXCR2 signalling thereby interfering with the inflammatory response. We have designed 14 CXCL8 mutants that we subdivided into three classes according to number and site of mutations. The decoys were characterized by IFTs (isothermal fluorescence titrations) and SPR (surface plasmon resonance) to determine GAG affinity. Protein stability and structural changes were evaluated by far-UV CD spectroscopy and knocked-out GPCR response was shown by Boyden chamber and Ca2+ release assays. From these experiments, CXCL8(Δ6F17KF21KE70KN71K) emerged with the most promising in vitro characteristics. This mutant was therefore further investigated in a murine model of mBSA (methylated BSA)-induced arthritis in mice where it showed strong anti-inflammatory activity. Based on these results, we propose that dominant-negative CXCL8 decoy proteins are a promising class of novel biopharmaceuticals with high therapeutic potential in inflammatory diseases.


Assuntos
Anti-Inflamatórios/farmacologia , Interleucina-8/farmacologia , Substituição de Aminoácidos , Animais , Anti-Inflamatórios/química , Artrite Reumatoide/tratamento farmacológico , Sítios de Ligação , Bovinos , Desenho de Fármacos , Avaliação Pré-Clínica de Medicamentos , Guanidina/química , Heparitina Sulfato/química , Humanos , Interleucina-8/química , Interleucina-8/genética , Masculino , Camundongos , Camundongos Endogâmicos C57BL , Mutagênese Sítio-Dirigida , Ligação Proteica , Desnaturação Proteica , Receptores de Interleucina-8A/química
20.
Artigo em Inglês | MEDLINE | ID: mdl-23577669

RESUMO

Many biological membranes consist of 50% or more (by weight) membrane proteins, which constitute approximately one-third of all proteins expressed in biological organisms. Helical membrane proteins function as receptors, enzymes, and transporters, among other unique cellular roles. Additionally, most drugs have membrane proteins as their receptors, notably the superfamily of G protein-coupled receptors with seven transmembrane helices. Determining the structures of membrane proteins is a daunting task because of the effects of the membrane environment; specifically, it has been difficult to combine biologically compatible environments with the requirements for the established methods of structure determination. There is strong motivation to determine the structures in their native phospholipid bilayer environment so that perturbations from nonnatural lipids and phases do not have to be taken into account. At present, the only method that can work with proteins in liquid crystalline phospholipid bilayers is solid-state NMR spectroscopy.


Assuntos
Proteínas de Membrana/química , Ressonância Magnética Nuclear Biomolecular/métodos , Receptores Acoplados a Proteínas G/química , Bicamadas Lipídicas/química , Micelas , Modelos Moleculares , Fosfolipídeos/química , Estrutura Secundária de Proteína , Receptores de Interleucina-8A/química
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